Jason Bret Harris, PhD

Computational Chemist/Biologist

More content coming soon...


PERL SCRIPTS
  • download(3D)Proteins.pl (JasonBretHarris)
    Download PDB files from the Protein Databank using a list of PDB IDs.

  • download(3D)Chemicals.pl (JasonBretHarris)
    Download SDF files from the PUBCHEM Databank using a list of CIDs.

  • Convert_ChemNames_to_CIDs.pl (JasonBretHarris)
    Convert Chemical Names to PUBCHEM CIDs using a list of Names

  • Transpose_Matrix.pl (JasonBretHarris)
    Transposes (switches ROWS and COLUMNS) in a 2D matrix.

  • FitLine_Rsqr.pl (JasonBretHarris)
    Calculates line (y=mx+b) and Rsquare (r2) for set of points.


  • PYTHON SCRIPTS